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CC1G_05946 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05946" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05946Uncharacterized protein (253 aa)    
Predicted Functional Partners:
CC1G_11763
CDC5 (822 aa)
     
 
  0.828
CC1G_13867
pre-mRNA-processing protein 45 (579 aa)
     
 
  0.789
CC1G_02978
pre-mRNA splicing factor (1090 aa)
     
 
  0.752
CC1G_02914
Smad nuclear interacting protein 1 (283 aa)
     
 
  0.735
CC1G_08861
Maternal g10 transcript (148 aa)
     
 
  0.729
CC1G_10289
Nuclear matrix protein NMP200 (506 aa)
     
 
  0.714
CC1G_05666
SMB (168 aa)
     
 
  0.709
CC1G_11166
pre-mRNA-splicing factor CWC26 (322 aa)
     
 
  0.632
CC1G_03236
Spliceosomal zinc finger-containing protein (332 aa)
     
 
  0.624
CC1G_09166
pre-mRNA-splicing factor CWC22 (890 aa)
     
 
  0.615
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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