STRINGSTRING
CC1G_08390 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08390" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08390Uncharacterized protein (128 aa)    
Predicted Functional Partners:
CC1G_02986
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (231 aa)
     
 
  0.983
CC1G_14140
Ribosome biogenesis protein NSA2 (292 aa)
     
 
  0.977
CC1G_04212
Ribosome biogenesis protein RLP24 (173 aa)
     
 
  0.968
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family (245 aa)
     
 
  0.956
CC1G_06273
RNA binding protein (406 aa)
     
 
  0.950
CC1G_14285
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (672 aa)
     
 
  0.947
CC1G_04708
GTPase (502 aa)
     
 
  0.943
CC1G_04107
Uncharacterized protein (197 aa)
     
 
  0.943
CC1G_06342
Proliferation-associated 2G4 (394 aa)
     
 
  0.927
CC1G_05895
Ribosome assembly protein (534 aa)
     
 
  0.926
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (7%) [HD]