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CC1G_06981 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06981" - Transcription activator snf2l1 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06981Transcription activator snf2l1 (1102 aa)    
Predicted Functional Partners:
CC1G_07733
Smarcc1 protein (761 aa)
     
 
  0.927
CC1G_00568
Histone acetyltransferase type B subunit 2 (468 aa)
     
 
  0.918
CC1G_03672
Uncharacterized protein (906 aa)
     
 
  0.886
CC1G_10284
ATP dependent DNA helicase; Belongs to the MCM family (846 aa)
     
 
  0.781
CC1G_12238
Uncharacterized protein (241 aa)
     
 
  0.773
CC1G_08736
Histone H2A (149 aa)
     
 
  0.773
CC1G_03225
Histone acetyltransferase NGF-1 (629 aa)
     
 
  0.773
CC1G_11763
CDC5 (822 aa)
     
 
  0.770
CC1G_01319
DNA helicase; Mis5 protein; Belongs to the MCM family (963 aa)
     
 
  0.759
CC1G_04383
ATP dependent DNA helicase; Belongs to the MCM family (737 aa)
     
 
  0.747
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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