STRINGSTRING
CC1G_02428 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02428" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02428Uncharacterized protein (249 aa)    
Predicted Functional Partners:
CC1G_01893
t-SNARE; Belongs to the syntaxin family (377 aa)
     
  0.992
CC1G_15423
Uncharacterized protein (143 aa)
     
  0.992
CC1G_00207
t-SNARE VTI1 (215 aa)
     
  0.980
CC1G_10503
Uncharacterized protein (248 aa)
     
  0.980
CC1G_05016
Uncharacterized protein; Belongs to the syntaxin family (271 aa)
     
 
  0.963
CC1G_13714
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (222 aa)
     
 
  0.961
CC1G_01785
Integral membrane protein sed5 (337 aa)
     
 
  0.960
CC1G_09913
Vesicle membrane protein with acyltransferase activity; Belongs to the synaptobrevin family (199 aa)
     
 
  0.945
CC1G_00017
Protein transporter SEC22; Belongs to the synaptobrevin family (218 aa)
     
 
  0.943
CC1G_15034
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family (646 aa)
     
 
  0.930
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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