STRINGSTRING
CC1G_02454 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02454" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02454Uncharacterized protein (247 aa)    
Predicted Functional Partners:
CC1G_03770
ATP-dependent RNA helicase SUB2 (432 aa)
     
  0.974
CC1G_14673
Tho2 protein (2474 aa)
     
  0.968
CC1G_10065
Uncharacterized protein (618 aa)
     
  0.967
CC1G_00318
Uncharacterized protein (208 aa)
     
  0.917
CC1G_03581
Uncharacterized protein (266 aa)
         
    0.800
CC1G_07727
RNA annealing factor (229 aa)
         
 
0.800
CC1G_09967
Cap binding protein 80-PB (891 aa)
     
 
  0.775
CC1G_08323
RNP containing family member (164 aa)
     
 
  0.768
CC1G_13743
U5 small nuclear ribonucleoprotein component (986 aa)
     
      0.712
CC1G_02683
Mago nashi domain-containing protein (147 aa)
     
 
  0.645
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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