STRINGSTRING
CC1G_02546 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02546" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02546Uncharacterized protein (315 aa)    
Predicted Functional Partners:
CC1G_06263
Uncharacterized protein (329 aa)
     
 
  0.828
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
 
  0.828
CC1G_02006
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities (825 aa)
   
 
  0.769
CC1G_03822
Rad51B protein (451 aa)
     
 
  0.757
CC1G_06567
Uncharacterized protein (926 aa)
     
 
  0.745
CC1G_03320
Spo11 (353 aa)
     
 
  0.744
CC1G_09333
Uncharacterized protein (144 aa)
     
 
  0.721
CC1G_06798
recA/RAD51 family protein (311 aa)
     
 
  0.712
CC1G_05322
DNA binding protein (778 aa)
   
 
  0.684
CC1G_02025
Uncharacterized protein (235 aa)
     
 
  0.676
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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