STRINGSTRING
CC1G_02550 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02550" - Exodeoxyribonuclease 1 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02550Exodeoxyribonuclease 1 (895 aa)    
Predicted Functional Partners:
CC1G_07448
DNA helicase (1129 aa)
   
 
  0.983
CC1G_11474
DNA replication helicase dna2 (1482 aa)
   
 
  0.981
CC1G_05221
DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR) (962 aa)
   
 
  0.964
CC1G_05322
DNA binding protein (778 aa)
     
 
  0.963
CC1G_07970
DNA mismatch repair protein (918 aa)
     
 
  0.960
CC1G_07736
RAD52 DNA repair protein RADC (584 aa)
     
 
  0.957
CC1G_02812
CAMK/CAMKL/CHK1 protein kinase; Belongs to the protein kinase superfamily (462 aa)
     
 
  0.950
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
   
 
  0.946
CC1G_08102
Ku70 (559 aa)
     
 
  0.939
CC1G_08633
Ku80 (855 aa)
     
 
  0.926
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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