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CC1G_03524 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03524" - SR-rich pre-mRNA splicing activator in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03524SR-rich pre-mRNA splicing activator (557 aa)    
Predicted Functional Partners:
CC1G_03406
Uncharacterized protein (606 aa)
     
 
  0.877
CC1G_10331
Uncharacterized protein (602 aa)
     
 
  0.816
CC1G_01067
ATP dependent helicase (1079 aa)
     
 
  0.816
CC1G_14170
Transcription factor (1141 aa)
     
 
  0.812
CC1G_03581
Uncharacterized protein (266 aa)
     
 
  0.797
CC1G_11763
CDC5 (822 aa)
     
 
  0.772
CC1G_00067
pre-mRNA-splicing factor CWC21 (506 aa)
     
 
  0.756
CC1G_10065
Uncharacterized protein (618 aa)
     
 
  0.743
CC1G_01109
Uncharacterized protein (279 aa)
     
 
  0.743
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
   
  0.706
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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