STRINGSTRING
CC1G_11918 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11918" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11918Uncharacterized protein (1706 aa)    
Predicted Functional Partners:
CC1G_13908
Uncharacterized protein (920 aa)
     
 
  0.935
CC1G_05412
Uncharacterized protein (1149 aa)
     
 
  0.924
CC1G_06238
Uncharacterized protein (786 aa)
     
 
  0.904
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
       
 
  0.900
CC1G_07448
DNA helicase (1129 aa)
     
 
  0.887
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
  0.873
CC1G_08126
atypical/PIKK/ATR protein kinase (2345 aa)
     
 
  0.872
CC1G_00839
atypical/PIKK/ATM protein kinase (2922 aa)
     
 
  0.851
CC1G_08637
TPR-containing protein Mql1 (1127 aa)
     
 
  0.844
CC1G_08195
Uncharacterized protein (549 aa)
       
 
  0.826
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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