STRINGSTRING
CC1G_01138 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01138" - Chaperone in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01138Chaperone (431 aa)    
Predicted Functional Partners:
CC1G_07999
Small nuclear ribonucleoprotein (556 aa)
     
 
  0.996
CC1G_11396
Nucleolar protein NOP58 (569 aa)
     
 
  0.986
CC1G_08307
Fibrillarin-like protein (218 aa)
     
 
  0.978
CC1G_03629
Centromere/microtubule binding protein cbf5 (522 aa)
     
 
  0.974
CC1G_07169
Uncharacterized protein (449 aa)
     
 
  0.941
CC1G_11196
Uncharacterized protein (706 aa)
     
   
  0.940
CC1G_10586
ATP-dependent RNA helicase HAS1 (640 aa)
     
 
  0.940
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (768 aa)
     
   
  0.939
CC1G_14600
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1726 aa)
     
 
  0.934
CC1G_05708
ATP-dependent RNA helicase dbp9 (633 aa)
     
 
  0.919
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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