STRINGSTRING
CC1G_01160 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01160" - Retrograde transporter in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01160Retrograde transporter (1220 aa)    
Predicted Functional Partners:
CC1G_02278
Uncharacterized protein (869 aa)
     
 
  0.966
CC1G_00186
Uncharacterized protein (594 aa)
     
 
  0.964
CC1G_07042
Vesicular transporter (193 aa)
     
 
  0.902
CC1G_03783
Uncharacterized protein (732 aa)
     
 
  0.888
CC1G_00582
Uncharacterized protein (647 aa)
     
 
  0.876
CC1G_02323
COG3 protein (1001 aa)
     
   
  0.873
CC1G_15335
Uncharacterized protein (762 aa)
     
   
  0.872
CC1G_02428
Uncharacterized protein (249 aa)
       
 
  0.843
CC1G_12185
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (1004 aa)
     
   
  0.838
CC1G_00148
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (778 aa)
     
 
  0.837
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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