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CC1G_01212 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01212" - RNA-3'-phosphate cyclase in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01212RNA-3’-phosphate cyclase (337 aa)    
Predicted Functional Partners:
CC1G_14610
Brix domain-containing protein (202 aa)
     
 
  0.997
CC1G_15058
GTP binding protein (1163 aa)
     
 
  0.993
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (448 aa)
     
   
  0.992
CC1G_04441
U3 small nucleolar RNA-associated protein 4 (991 aa)
     
 
  0.990
CC1G_01287
Cell adhesion protein byn-1 (456 aa)
     
 
  0.988
CC1G_11396
Nucleolar protein NOP58 (569 aa)
     
 
  0.987
CC1G_13891
RNA-binding protein pno1 (477 aa)
     
 
  0.979
CC1G_08122
Nucleolar protein 14 (942 aa)
     
 
  0.977
CC1G_00329
kDa Trp-Asp repeats containing protein (519 aa)
     
 
  0.972
CC1G_08666
Rnu3ip2 protein (616 aa)
     
 
  0.972
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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