STRINGSTRING
CC1G_01232 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01232" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01232Uncharacterized protein (283 aa)    
Predicted Functional Partners:
CC1G_13946
Signal recognition particle binding protein (661 aa)
     
 
  0.965
CC1G_06643
Translocation protein sec63 (660 aa)
     
 
  0.810
CC1G_04206
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily (574 aa)
     
 
  0.790
CC1G_03539
Endoplasmic reticulum receptor (299 aa)
     
 
  0.769
CC1G_08654
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (602 aa)
     
   
  0.678
CC1G_02172
Uncharacterized protein (120 aa)
     
 
  0.677
CC1G_07062
Vacuolar transporter chaperone 4 (850 aa)
           
  0.665
CC1G_14101
Uncharacterized protein (316 aa)
     
   
  0.664
CC1G_10102
Uncharacterized protein (168 aa)
     
   
  0.663
CC1G_07282
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (97 aa)
     
 
  0.645
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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