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CC1G_04178 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04178" - SNF2 family domain-containing protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04178SNF2 family domain-containing protein (840 aa)    
Predicted Functional Partners:
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
 
  0.967
CC1G_14395
ATP-dependent DNA helicase pcra (966 aa)
   
 
  0.963
CC1G_07736
RAD52 DNA repair protein RADC (584 aa)
     
 
  0.959
CC1G_07448
DNA helicase (1129 aa)
     
 
  0.948
CC1G_02333
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (929 aa)
   
 
  0.937
CC1G_03822
Rad51B protein (451 aa)
     
 
  0.905
CC1G_06263
Uncharacterized protein (329 aa)
     
 
  0.894
CC1G_01808
Rad51; Belongs to the RecA family (364 aa)
       
 
  0.887
CC1G_14217
RAD54B protein (1055 aa)
     
0.875
CC1G_08126
atypical/PIKK/ATR protein kinase (2345 aa)
     
 
  0.858
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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