STRINGSTRING
CC1G_04181 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04181" - Mitochondrial 54S ribosomal protein YmL9 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04181Mitochondrial 54S ribosomal protein YmL9; Belongs to the universal ribosomal protein uL3 family (257 aa)    
Predicted Functional Partners:
CC1G_10539
Mitochondrial 54S ribosomal protein YmL6 (297 aa)
 
 
  0.989
CC1G_07885
Mitochondrial 54S ribosomal protein YmL23 (176 aa)
 
 
  0.989
CC1G_02931
Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family (206 aa)
 
  0.988
CC1G_05190
Uncharacterized protein (250 aa)
   
 
  0.983
CC1G_03205
Mitochondrial 37S ribosomal protein MRPS9; Belongs to the universal ribosomal protein uS9 family (350 aa)
 
 
  0.978
CC1G_06776
Mitochondrial 54S ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family (280 aa)
   
 
  0.974
CC1G_01012
Mitochondrial 54S ribosomal protein YmL2 (147 aa)
   
 
  0.952
CC1G_05321
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family (285 aa)
     
 
  0.947
CC1G_00296
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family (244 aa)
   
 
  0.947
CC1G_00694
Mitochondrial 54S ribosomal protein RML2 (401 aa)
 
 
  0.935
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (9%) [HD]