STRINGSTRING
CC1G_04213 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04213" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04213Uncharacterized protein (1905 aa)    
Predicted Functional Partners:
CC1G_08986
Autophagy-type protein 18 (497 aa)
     
  0.985
CC1G_01076
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (858 aa)
     
  0.979
CC1G_15592
other/ULK/ULK protein kinase (868 aa)
     
  0.978
CC1G_05797
Cysteine protease (1034 aa)
     
   
  0.936
CC1G_07785
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily (870 aa)
     
 
  0.913
CC1G_00211
SVP1-like protein 2 (453 aa)
     
 
  0.910
CC1G_08691
other/VPS15 protein kinase (1642 aa)
     
   
  0.882
CC1G_01942
Beclin 1 protein (488 aa)
     
   
  0.878
CC1G_06302
atypical/PIKK/PI3K protein kinase; Belongs to the PI3/PI4-kinase family (852 aa)
     
   
  0.874
CC1G_10165
Autophagy protein 7 (689 aa)
     
   
  0.867
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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