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CC1G_04229 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04229" - Transcription elongation factor 1 homolog in Coprinopsis cinerea
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
CC1G_04229Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions (115 aa)    
Predicted Functional Partners:
CC1G_10334
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1118 aa)
       
 
  0.758
CC1G_01891
DNA-directed RNA polymerase II polypeptide (360 aa)
     
 
  0.729
CC1G_11229
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1745 aa)
     
 
  0.728
CC1G_00908
Uncharacterized protein (134 aa)
     
      0.724
CC1G_03663
RNA polymerase I (153 aa)
       
 
  0.669
CC1G_05976
Exosome component Rrp46 (238 aa)
     
   
  0.634
CC1G_10952
Uncharacterized protein; Belongs to the actin family (598 aa)
           
  0.626
CC1G_07076
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (123 aa)
     
 
  0.612
CC1G_06442
DNA-directed RNA polymerase I (208 aa)
     
      0.597
CC1G_07048
Transcription factor iws1 (370 aa)
     
 
  0.584
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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