STRINGSTRING
CC1G_04293 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04293" - DRT111 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04293DRT111 (630 aa)    
Predicted Functional Partners:
CC1G_11763
CDC5 (822 aa)
     
 
  0.764
CC1G_01976
SR140 protein (688 aa)
     
      0.731
CC1G_01767
Splicing factor 3a (220 aa)
     
 
  0.730
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
 
  0.704
CC1G_10546
pre-rRNA-processing protein ESF1 (686 aa)
     
   
  0.679
CC1G_02930
Uncharacterized protein (394 aa)
     
   
  0.621
CC1G_06322
Methionyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (718 aa)
     
   
  0.610
CC1G_03829
pre-mRNA splicing factor (760 aa)
     
 
  0.573
CC1G_12379
U1 snRNP 70K protein (380 aa)
     
   
  0.520
CC1G_03774
ROK1; Belongs to the DEAD box helicase family (574 aa)
     
   
  0.496
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (16%) [HD]