STRINGSTRING
CC1G_04299 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04299" - Uncharacterized protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04299Uncharacterized protein (255 aa)    
Predicted Functional Partners:
CC1G_09909
DNA polymerase epsilon catalytic subunit A (2229 aa)
       
 
  0.710
CC1G_05202
Polynucleotide kinase 3’-phosphatase (457 aa)
       
 
  0.706
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (422 aa)
       
 
  0.697
CC1G_01574
Uncharacterized protein (627 aa)
           
  0.679
CC1G_01223
Diadenosine 5’,5’’’-P1,P4-tetraphosphate asymmetrical hydrolase (180 aa)
           
  0.639
CC1G_11289
DNA ligase I (803 aa)
       
 
  0.612
CC1G_04408
Uncharacterized protein (622 aa)
           
  0.594
CC1G_11182
Uncharacterized protein (142 aa)
           
  0.593
CC1G_01194
N-glycosylase/DNA lyase (409 aa)
       
 
  0.576
CC1G_05939
DNA-(apurinic or apyrimidinic site) lyase 2 (609 aa)
       
 
  0.548
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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