STRINGSTRING
CC1G_04307 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04307" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04307Uncharacterized protein (369 aa)    
Predicted Functional Partners:
CC1G_05818
WD repeat-containing protein 46 (727 aa)
     
 
  0.998
CC1G_08666
Rnu3ip2 protein (616 aa)
     
 
  0.997
CC1G_05720
Uncharacterized protein (508 aa)
     
 
  0.996
CC1G_05272
WD repeat-containing protein (755 aa)
     
 
  0.996
CC1G_03766
Uncharacterized protein (767 aa)
     
 
  0.996
CC1G_14209
U3 snoRNP protein (667 aa)
     
 
  0.995
CC1G_09858
ATP-dependent RNA helicase dbp-4 (816 aa)
     
 
  0.995
CC1G_06273
RNA binding protein (406 aa)
     
      0.993
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
 
  0.990
RRP36
rRNA biogenesis protein RRP36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (347 aa)
     
   
  0.989
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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