STRINGSTRING
CC1G_11940 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11940" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11940Uncharacterized protein (334 aa)    
Predicted Functional Partners:
CC1G_05412
Uncharacterized protein (1149 aa)
     
 
  0.983
CC1G_01911
Smc5-6 complex non-SMC subunit Nse4 (267 aa)
     
 
  0.960
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
  0.959
CC1G_03460
Uncharacterized protein (223 aa)
     
 
  0.959
CC1G_12491
Structural maintenance of chromosomes protein; Nuclear condensin complex protein (1207 aa)
     
 
  0.747
CC1G_13764
Smc4 chromosome structural maintenance 4-like protein (569 aa)
     
 
  0.556
CC1G_13763
Uncharacterized protein (951 aa)
     
 
  0.556
CC1G_15063
Structural maintenance of chromosomes protein (1182 aa)
     
 
  0.529
CC1G_14869
pre-mRNA splicing factor ini1 (154 aa)
     
   
  0.438
CC1G_06464
Uncharacterized protein (657 aa)
     
   
  0.404
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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