STRINGSTRING
CC1G_12962 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12962" - Translocation protein sec66 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12962Translocation protein sec66 (218 aa)    
Predicted Functional Partners:
CC1G_06643
Translocation protein sec63 (660 aa)
     
 
  0.949
CC1G_03539
Endoplasmic reticulum receptor (299 aa)
       
 
  0.921
CC1G_03157
Protein transporter; Belongs to the SecY/SEC61-alpha family (477 aa)
       
 
  0.751
CC1G_03557
Uncharacterized protein (369 aa)
       
 
  0.679
CC1G_11830
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex (251 aa)
     
 
  0.678
CC1G_14207
Heat shock protein; Belongs to the heat shock protein 70 family (727 aa)
       
 
  0.596
CC1G_12348
Hsp70-like protein; Belongs to the heat shock protein 70 family (655 aa)
       
 
  0.596
CC1G_11817
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (198 aa)
       
 
  0.547
CC1G_01841
SEC61 (70 aa)
       
 
  0.525
CC1G_00222
Uncharacterized protein (384 aa)
       
 
  0.497
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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