STRINGSTRING
CC1G_05093 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05093" - Uncharacterized protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05093Uncharacterized protein (316 aa)    
Predicted Functional Partners:
CC1G_15063
Structural maintenance of chromosomes protein (1182 aa)
     
 
  0.964
CC1G_05280
Cohesin-associated protein Pds5 (1254 aa)
     
 
  0.941
CC1G_01229
CHTF18 protein (940 aa)
     
 
  0.905
CC1G_06918
Cohesin subunit (1364 aa)
     
 
  0.901
CC1G_02409
Cysteine-type endopeptidase (2337 aa)
     
 
  0.899
rad9
Protein rad9; Plays a structural role in chromatin. Involved in sister chromatid cohesion during meiosis, possibly by interacting with the cohesin complex. Also participates in DNA repair and meiotic homolog pairing; Belongs to the SCC2/Nipped-B family (2107 aa)
     
 
  0.897
CC1G_10710
Structural maintenance of chromosomes protein; Cohesin complex subunit psm1 (1243 aa)
     
 
  0.869
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
  0.862
CC1G_05633
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (368 aa)
     
 
  0.860
CC1G_03326
Uncharacterized protein (1057 aa)
     
 
  0.839
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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