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CC1G_05114 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05114" - GTP-binding protein ypt1 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05114GTP-binding protein ypt1 (204 aa)    
Predicted Functional Partners:
CC1G_01179
Trafficking protein particle complex subunit BET3; BET3 family protein (205 aa)
     
 
  0.960
CC1G_04565
Uncharacterized protein (170 aa)
       
 
  0.956
CC1G_13887
TRAPP complex subunit Trs23 (135 aa)
       
 
  0.951
CC1G_03746
Transporter particle subunit trs31 (243 aa)
     
 
  0.939
CC1G_15141
Uncharacterized protein (270 aa)
       
 
  0.931
CC1G_06818
CPS1 protein; Belongs to the small GTPase superfamily. Arf family (182 aa)
     
 
0.921
CC1G_01740
RAB GDP-dissociation inhibitor; Belongs to the Rab GDI family (449 aa)
     
 
  0.912
CC1G_06871
Uncharacterized protein (828 aa)
     
 
  0.911
CC1G_00507
SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family (701 aa)
     
 
  0.903
CC1G_14178
Tbc1 domain family protein (565 aa)
     
 
  0.893
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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