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CC1G_05127 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05127" - Rad21 protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05127Rad21 protein (542 aa)    
Predicted Functional Partners:
CC1G_15063
Structural maintenance of chromosomes protein (1182 aa)
     
  0.991
CC1G_10710
Structural maintenance of chromosomes protein; Cohesin complex subunit psm1 (1243 aa)
     
  0.990
CC1G_06918
Cohesin subunit (1364 aa)
     
  0.988
CC1G_02409
Cysteine-type endopeptidase (2337 aa)
     
  0.951
CC1G_05280
Cohesin-associated protein Pds5 (1254 aa)
     
 
  0.917
rad9
Protein rad9; Plays a structural role in chromatin. Involved in sister chromatid cohesion during meiosis, possibly by interacting with the cohesin complex. Also participates in DNA repair and meiotic homolog pairing; Belongs to the SCC2/Nipped-B family (2107 aa)
     
 
  0.840
CC1G_12491
Structural maintenance of chromosomes protein; Nuclear condensin complex protein (1207 aa)
     
 
  0.837
CC1G_07657
DNA mismatch repair protein msh6 (1269 aa)
     
 
  0.813
CC1G_03652
Rad21 protein (572 aa)
         
 
0.800
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
  0.789
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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