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TUB4 protein (Coprinopsis cinerea) - STRING interaction network
"TUB4" - Tubulin gamma chain in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUB4Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly (By similarity) (453 aa)    
Predicted Functional Partners:
CC1G_00343
Spindle pole body component; Gamma-tubulin complex component 3 (901 aa)
     
 
  0.988
CC1G_15440
Spindle pole body component; Gamma-tubulin complex component 2 (837 aa)
     
 
  0.987
CC1G_00943
Uncharacterized protein (75 aa)
       
 
  0.935
CC1G_01867
Spindle pole body component (716 aa)
     
 
  0.909
CC1G_00652
Centrin 3 (164 aa)
     
 
  0.871
CC1G_01455
Uncharacterized protein (1127 aa)
     
 
  0.819
CC1G_10526
Mitotic spindle checkpoint protein MAD2 (208 aa)
     
 
  0.793
CC1G_13915
Microtubule associated protein (2140 aa)
     
 
  0.731
CC1G_11763
CDC5 (822 aa)
       
      0.717
CC1G_03834
Uncharacterized protein (639 aa)
     
 
  0.651
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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