STRINGSTRING
CC1G_05187 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05187" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05187Uncharacterized protein (853 aa)    
Predicted Functional Partners:
CC1G_02678
Uncharacterized protein (380 aa)
     
 
  0.970
CC1G_09124
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily (826 aa)
     
 
  0.902
CC1G_10654
Histone deacetylase RPD3 (557 aa)
     
 
  0.881
CC1G_04427
Histone deacetylase Hda1 (590 aa)
     
 
  0.881
CC1G_13998
Histone deacetylase-3; Belongs to the histone deacetylase family. HD Type 1 subfamily (504 aa)
     
 
  0.815
CC1G_05319
Sin3b (1588 aa)
     
 
  0.791
CC1G_06606
Transcription regulatory protein (1374 aa)
     
 
  0.791
CC1G_13724
Uncharacterized protein (195 aa)
     
 
  0.753
CC1G_06609
Uncharacterized protein (128 aa)
     
 
  0.753
CC1G_05302
Histone deacetylase 8 (384 aa)
     
 
  0.709
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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