STRINGSTRING
CC1G_03797 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03797" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03797Uncharacterized protein (745 aa)    
Predicted Functional Partners:
CC1G_13622
Uncharacterized protein (580 aa)
     
   
  0.719
CC1G_02631
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 (760 aa)
     
 
  0.635
CC1G_06213
ATP-dependent RNA helicase Prp43 (704 aa)
     
 
  0.635
CC1G_04561
Splicing factor U2AF 26 kDa subunit (230 aa)
     
 
  0.577
CC1G_00917
Sip1/TFIP11 interacting protein (1032 aa)
     
 
  0.553
CC1G_14189
Uncharacterized protein (397 aa)
       
 
  0.523
CC1G_09032
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (550 aa)
     
 
  0.517
CC1G_08023
S-adenosylmethionine transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family (275 aa)
           
  0.512
CC1G_11825
Oligoribonuclease (216 aa)
           
  0.504
CC1G_00857
Ubiquitin-specific protease; Belongs to the peptidase C19 family (1315 aa)
     
   
  0.492
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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