STRINGSTRING
CC1G_03806 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03806" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03806Uncharacterized protein (544 aa)    
Predicted Functional Partners:
CC1G_14603
Uncharacterized protein (390 aa)
         
 
0.800
CC1G_14814
3’ tRNA processing endoribonuclease (946 aa)
         
    0.800
CC1G_01996
rRNA processing protein RRP12 (1256 aa)
     
   
  0.624
CC1G_06538
U3 small nucleolar RNA-associated protein (910 aa)
     
        0.619
CC1G_08122
Nucleolar protein 14 (942 aa)
     
        0.611
CC1G_11196
Uncharacterized protein (706 aa)
     
        0.609
CC1G_01231
WD-repeat-containing protein (926 aa)
     
        0.609
CC1G_01405
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1203 aa)
     
   
  0.601
CC1G_00216
WD-repeat-containing protein (956 aa)
     
        0.599
CC1G_09118
Uncharacterized protein (1994 aa)
     
        0.599
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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