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CC1G_03830 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03830" - Mitochondrial 54S ribosomal protein YmL31 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03830Mitochondrial 54S ribosomal protein YmL31 (105 aa)    
Predicted Functional Partners:
CC1G_00076
Mitochondrial 37S ribosomal protein YmS18 (207 aa)
     
 
  0.900
CC1G_06496
Nam9 protein (390 aa)
     
 
  0.882
CC1G_00197
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family (176 aa)
     
 
  0.873
CC1G_05007
Mitochondrial 54S ribosomal protein YmL7/YmL5 (301 aa)
     
 
  0.872
CC1G_11987
Mitochondrial 54S ribosomal protein YmL38/YmL34; Belongs to the universal ribosomal protein uL14 family (133 aa)
     
      0.830
CC1G_10823
Mitochondrial 37S ribosomal protein MRP4 (308 aa)
       
      0.723
CC1G_14586
Uncharacterized protein (173 aa)
     
      0.722
CC1G_00964
GTP cyclohydrolase II (249 aa)
     
   
  0.682
CC1G_07118
Uncharacterized protein (191 aa)
     
      0.669
CC1G_09519
Mitochondrial 54S ribosomal protein domain-containing protein (192 aa)
     
      0.649
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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