STRINGSTRING
CC1G_03831 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03831" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03831Uncharacterized protein (294 aa)    
Predicted Functional Partners:
CC1G_03774
ROK1; Belongs to the DEAD box helicase family (574 aa)
     
 
  0.850
CC1G_05720
Uncharacterized protein (508 aa)
     
 
  0.806
CC1G_07169
Uncharacterized protein (449 aa)
     
 
  0.802
CC1G_08839
Uncharacterized protein (319 aa)
     
 
  0.800
CC1G_13891
RNA-binding protein pno1 (477 aa)
     
 
  0.790
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
 
  0.771
CC1G_06878
Uncharacterized protein (259 aa)
     
        0.768
CC1G_03215
Ribosome biogenesis protein tsr1 (789 aa)
     
   
  0.762
CC1G_02297
Uncharacterized protein (390 aa)
     
        0.760
CC1G_01996
rRNA processing protein RRP12 (1256 aa)
     
   
  0.756
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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