STRINGSTRING
CC1G_03898 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03898" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03898Uncharacterized protein (289 aa)    
Predicted Functional Partners:
CC1G_01674
F1 ATPase assembly protein 11 (419 aa)
     
 
  0.921
CC1G_01082
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (483 aa)
     
 
  0.825
CC1G_09000
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (554 aa)
       
 
  0.821
CC1G_08218
H-sco1 (223 aa)
 
 
   
  0.818
CC1G_22006
ATPase subunit 6 (257 aa)
           
  0.769
CC1G_05173
Mitochondrial 54S ribosomal protein YmL17/YmL30 (297 aa)
     
   
  0.742
CC1G_03574
F1F0 ATP synthase assembly protein Atp10 (318 aa)
       
 
  0.727
CC1G_06776
Mitochondrial 54S ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family (280 aa)
   
        0.717
CC1G_13779
Mitochondrial inner membrane protease ATP23; Has a dual role in the assembly of mitochondrial ATPase (233 aa)
     
 
  0.704
CC1G_11438
Uncharacterized protein; Belongs to the complex I LYR family (102 aa)
     
   
  0.701
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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