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CC1G_10837 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_10837" - Splicing factor 3b subunit 4 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10837Splicing factor 3b subunit 4 (332 aa)    
Predicted Functional Partners:
CC1G_14624
Peptide-binding protein (706 aa)
     
 
  0.998
CC1G_05341
pre-mRNA splicing factor prp1 (1051 aa)
       
 
  0.998
CC1G_03736
Microfibrillar-associated protein 1 (1095 aa)
       
 
  0.998
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
  0.997
CC1G_14869
pre-mRNA splicing factor ini1 (154 aa)
     
  0.996
CC1G_06614
Uncharacterized protein (78 aa)
     
  0.996
CC1G_10184
Spliceosome associated protein 145 (599 aa)
     
  0.993
CC1G_01767
Splicing factor 3a (220 aa)
     
 
  0.985
CC1G_02328
pre-mRNA-splicing factor RSE1 (1213 aa)
     
  0.980
CC1G_04531
pre-mRNA-splicing factor rse1 (1205 aa)
     
  0.980
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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