STRINGSTRING
CC1G_01550 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01550" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01550Uncharacterized protein (1035 aa)    
Predicted Functional Partners:
CC1G_01173
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (214 aa)
       
 
  0.884
CC1G_08323
RNP containing family member (164 aa)
       
 
  0.848
CC1G_01236
Ubiquitin-conjugating enzyme9; Belongs to the ubiquitin-conjugating enzyme family (158 aa)
       
 
  0.846
CC1G_00587
Uncharacterized protein (988 aa)
     
   
  0.836
CC1G_08000
Uncharacterized protein (1052 aa)
     
   
  0.816
CC1G_00419
Ran binding protein 11 (1048 aa)
     
   
  0.810
CC1G_04693
transportin-PC (915 aa)
     
   
  0.805
CC1G_09106
Karyopherin Kap95 (864 aa)
           
  0.795
CC1G_10965
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (113 aa)
       
 
  0.756
LOS1
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre- tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity) (1065 aa)
     
   
  0.755
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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