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CC1G_01569 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01569" - GATA-binding factor 6-B in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01569GATA-binding factor 6-B (877 aa)    
Predicted Functional Partners:
CC1G_10373
Uncharacterized protein (471 aa)
       
 
  0.723
CC1G_07160
MCMA (387 aa)
       
 
  0.673
CC1G_07230
Nitrate reductase (937 aa)
       
 
  0.486
CC1G_14145
Transcription factor ScGATA-6 (1080 aa)
     
 
0.470
CC1G_01991
Uncharacterized protein (327 aa)
     
 
  0.435
CC1G_01962
Uncharacterized protein (686 aa)
     
 
  0.435
CC1G_13701
atypical/TAF1 protein kinase (1054 aa)
     
   
  0.416
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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