STRINGSTRING
CC1G_01574 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01574" - Uncharacterized protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01574Uncharacterized protein (627 aa)    
Predicted Functional Partners:
CC1G_06861
Topoisomerase I (853 aa)
       
 
  0.874
MRE11
Double-strand break repair protein MRE11; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand- specific 3’-5’ exonuclease activity. Also involved in meiotic DSB processing (By similarity); Belongs to the MRE11/RAD32 family (735 aa)
     
 
  0.866
CC1G_04546
DNA excision repair protein ERCC-1 (356 aa)
       
 
  0.796
CC1G_13815
Endonuclease IV (320 aa)
       
 
  0.754
CC1G_01133
DNA-(apurinic or apyrimidinic site) lyase (304 aa)
     
 
  0.712
CC1G_05939
DNA-(apurinic or apyrimidinic site) lyase 2 (609 aa)
     
 
  0.712
CC1G_00839
atypical/PIKK/ATM protein kinase (2922 aa)
     
 
  0.704
NTH1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family (450 aa)
           
  0.686
CC1G_04299
Uncharacterized protein (255 aa)
           
  0.679
CC1G_07736
RAD52 DNA repair protein RADC (584 aa)
       
 
  0.665
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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