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CC1G_01639 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01639" - Amine oxidase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01639Amine oxidase (684 aa)    
Predicted Functional Partners:
CC1G_05458
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
 
  0.734
XP_001831694.1
Histone H4 (103 aa)
       
 
  0.734
XP_001831685.1
Histone H4 (103 aa)
       
 
  0.734
CC1G_07230
Nitrate reductase (937 aa)
     
   
  0.700
CC1G_08736
Histone H2A (149 aa)
       
 
  0.623
CC1G_15535
Setd1a protein (1614 aa)
     
 
  0.623
CC1G_03978
Squalene synthase (514 aa)
           
  0.621
CC1G_00384
Histone H3 (164 aa)
     
 
  0.592
CC1G_05755
Histone H3 (138 aa)
     
 
  0.592
XP_001831684.1
Histone-like type 2 (138 aa)
     
 
  0.592
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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