STRINGSTRING
CC1G_11031 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11031" - DNA-directed RNA polymerase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11031DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1341 aa)    
Predicted Functional Partners:
CC1G_08766
rRNA (adenine-N6,N6-)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (318 aa)
     
 
  0.907
CC1G_08656
Gamma DNA-directed DNA polymerase (1341 aa)
   
   
  0.830
CC1G_07310
Dihydrolipoamide dehydrogenase (508 aa)
     
   
  0.791
CC1G_01299
Putative mitochondrial 54S ribosomal protein MNP1 (185 aa)
     
 
  0.783
CC1G_22006
ATPase subunit 6 (257 aa)
           
  0.755
CC1G_22007
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis (400 aa)
           
  0.738
CC1G_15845
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1222 aa)
     
   
  0.730
CC1G_10400
ATP-dependent RNA helicase suv3 (846 aa)
     
 
  0.697
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (327 aa)
     
   
  0.696
CC1G_07970
DNA mismatch repair protein (918 aa)
     
   
  0.693
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (11%) [HD]