STRINGSTRING
CC1G_08744 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08744" - Mitochondrial protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08744Mitochondrial protein (323 aa)    
Predicted Functional Partners:
CC1G_14589
Uncharacterized protein (536 aa)
           
  0.782
LCL2
Long chronological lifespan protein 2; Probable component of the endoplasmic reticulum- associated degradation (ERAD) pathway (116 aa)
           
  0.550
CC1G_00946
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (305 aa)
 
 
        0.523
CC1G_13697
CAMK/CAMK-Unique protein kinase (215 aa)
       
 
  0.420
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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