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CC1G_02157 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02157" - rRNA primary transcript binding protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02157rRNA primary transcript binding protein (807 aa)    
Predicted Functional Partners:
CC1G_15058
GTP binding protein (1163 aa)
     
 
  0.976
CC1G_05272
WD repeat-containing protein (755 aa)
     
 
  0.963
CC1G_06533
Ribosomal processing; RNA-binding domain-containing protein (987 aa)
     
     
0.960
CC1G_03596
WD repeat-containing protein (937 aa)
     
 
  0.950
CC1G_05720
Uncharacterized protein (508 aa)
     
 
  0.945
CC1G_08504
Ribosome biogenesis protein Noc4 (645 aa)
     
 
  0.940
CC1G_02923
DHX37 protein (1245 aa)
     
 
  0.931
CC1G_11196
Uncharacterized protein (706 aa)
     
   
  0.929
CC1G_03215
Ribosome biogenesis protein tsr1 (789 aa)
     
 
  0.925
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (882 aa)
     
 
  0.922
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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