Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Endo-1,4-beta-xylanase; Xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family (230 aa)
Predicted Functional Partners:
Arabinan endo-1,5-alpha-L-arabinosidase; Secreted arabinase; Belongs to the glycosyl hydrolase 43 family (314 aa)
Acetylxylan esterase; Acetylxylan esterase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Degrades acetylated xylans by cleaving acetyl side groups from the hetero-xylan backbone; Belongs to the carbohydrate esterase 1 (CE1) family. AxeA subfamily (374 aa)
Acetyl xylan esterase (460 aa)
Acetyl xylan esterase (372 aa)
Carbonic anhydrase; Reversible hydration of carbon dioxide (314 aa)
Carbonic anhydrase; Reversible hydration of carbon dioxide (342 aa)
Carbonic anhydrase; Reversible hydration of carbon dioxide (302 aa)
Carbonic anhydrase; Reversible hydration of carbon dioxide (254 aa)
Carbonic anhydrase; Reversible hydration of carbon dioxide (326 aa)
Carbonic anhydrase (147 aa)
Your Current Organism:
NCBI taxonomy Id: 5346 Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus