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CC1G_10499 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_10499" - Rab7 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10499Rab7 (258 aa)    
Predicted Functional Partners:
CC1G_15003
Vacuolar fusion protein MON1 (629 aa)
     
 
  0.846
CC1G_13578
Cytoplasmic dynein heavy chain 1 (1167 aa)
       
  0.840
CC1G_03757
Dynein (3453 aa)
       
  0.840
CC1G_01439
Uncharacterized protein (546 aa)
         
  0.810
CC1G_06941
Dynein intermediate chain (628 aa)
         
    0.800
CC1G_02122
GTP-binding protein ypt7 (213 aa)
         
 
0.800
CC1G_05746
Dynein intermediate chain (666 aa)
         
    0.800
CC1G_03710
RAB small monomeric GTPase (203 aa)
         
 
0.800
CC1G_10201
Vacuolar membrane protein (1133 aa)
     
 
  0.696
CC1G_03547
Vacuolar protein sorting 16 isoform 1 (847 aa)
       
 
  0.692
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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