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CC1G_05790 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05790" - RNA helicase in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05790RNA helicase (717 aa)    
Predicted Functional Partners:
CC1G_10400
ATP-dependent RNA helicase suv3 (846 aa)
     
 
  0.800
CC1G_13743
U5 small nuclear ribonucleoprotein component (986 aa)
     
 
  0.741
CC1G_11763
CDC5 (822 aa)
     
 
  0.725
CC1G_05341
pre-mRNA splicing factor prp1 (1051 aa)
     
 
  0.722
CC1G_08291
ATP-dependent RNA helicase eIF4A (397 aa)
     
 
  0.719
CC1G_06756
Cap binding protein; Belongs to the eukaryotic initiation factor 4E family (301 aa)
     
 
  0.712
CC1G_14285
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (672 aa)
     
 
  0.675
CC1G_12096
Eukaryotic initiation factor 4F subunit P130 (1476 aa)
     
 
  0.670
CC1G_07577
ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family (466 aa)
     
 
  0.659
CC1G_06853
ATP-dependent RNA helicase DBP10 (949 aa)
     
   
  0.646
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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