STRINGSTRING
CC1G_05829 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05829" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05829Uncharacterized protein (296 aa)    
Predicted Functional Partners:
CC1G_06666
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (471 aa)
       
 
  0.938
CC1G_00695
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (462 aa)
       
 
  0.929
CC1G_03628
DNA ATP-dependent helicase (1625 aa)
       
 
  0.891
CC1G_12191
Chromatin remodeling complex subunit; Belongs to the actin family (732 aa)
       
 
  0.816
CC1G_12026
Uncharacterized protein (792 aa)
     
      0.708
CC1G_00100
Brg1-associated factor b; Belongs to the actin family (437 aa)
     
 
  0.610
CC1G_13221
Uncharacterized protein (417 aa)
           
  0.595
CC1G_08127
YEATS family protein (255 aa)
     
 
  0.587
CC1G_07966
Txnl4a protein (142 aa)
     
        0.583
CC1G_04781
Rab geranylgeranyltransferase (327 aa)
     
        0.569
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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