STRINGSTRING
CC1G_05864 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05864" - lolT-1 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05864lolT-1 (443 aa)    
Predicted Functional Partners:
CC1G_14995
Uncharacterized protein (226 aa)
       
  0.934
CC1G_02949
DUF323 domain-containing protein (859 aa)
       
  0.934
CC1G_07198
Uncharacterized protein (301 aa)
       
  0.934
CC1G_01270
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (180 aa)
   
 
  0.922
CC1G_14194
DUF323 domain-containing protein (603 aa)
       
  0.908
CC1G_08622
Uncharacterized protein (119 aa)
     
 
  0.831
CC1G_10441
Uncharacterized protein (431 aa)
   
   
 
0.804
CC1G_11438
Uncharacterized protein; Belongs to the complex I LYR family (102 aa)
     
 
  0.688
CC1G_03730
NifU-like protein c (291 aa)
   
 
  0.687
CC1G_06716
Uncharacterized protein (234 aa)
   
 
  0.660
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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