STRINGSTRING
CC1G_12392 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12392" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12392Uncharacterized protein (1211 aa)    
Predicted Functional Partners:
CC1G_11834
Uncharacterized protein (982 aa)
         
  0.920
CC1G_09124
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily (826 aa)
     
0.894
CC1G_08658
Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones (623 aa)
       
  0.881
CC1G_15535
Setd1a protein (1614 aa)
     
 
0.877
CC1G_09236
Uncharacterized protein (589 aa)
     
  0.875
CC1G_08322
Uncharacterized protein (247 aa)
       
 
  0.826
CC1G_14135
Histone deacetylase clr3 (692 aa)
   
 
  0.729
CC1G_02887
Cullin-4B; Belongs to the cullin family (809 aa)
     
 
  0.711
CC1G_05206
JmjC domain-containing histone demethylation protein 1 (620 aa)
       
 
  0.708
CC1G_05758
Histone deacetylase (525 aa)
     
 
  0.635
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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