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CC1G_06480 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06480" - VHS domain-containing protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06480VHS domain-containing protein (514 aa)    
Predicted Functional Partners:
CC1G_00724
Uncharacterized protein (438 aa)
       
 
  0.755
CC1G_00914
Gamma-adaptin (846 aa)
     
 
  0.732
CC1G_10110
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
       
 
  0.716
CC1G_11833
Ubiquitin (305 aa)
     
      0.706
CC1G_03676
Ubiquitin C (305 aa)
     
      0.706
CC1G_05661
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1700 aa)
     
 
  0.696
CC1G_11088
mRNA 3’-end-processing protein RNA14 (857 aa)
     
   
  0.686
CC1G_06521
Uncharacterized protein (405 aa)
 
            0.676
CC1G_05097
Translation initiation factor IF-2 (866 aa)
 
            0.673
CC1G_00149
ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family (181 aa)
       
 
  0.671
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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