STRINGSTRING
CC1G_06527 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06527" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06527Uncharacterized protein (765 aa)    
Predicted Functional Partners:
CC1G_07577
ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family (466 aa)
     
 
  0.985
CC1G_06299
Uncharacterized protein (2074 aa)
     
 
  0.959
CC1G_10065
Uncharacterized protein (618 aa)
     
 
  0.873
CC1G_07955
Nuclear pore complex protein (825 aa)
     
 
  0.857
CC1G_10523
Nucleoporin Nup157/170 (1349 aa)
     
 
  0.850
CC1G_03770
ATP-dependent RNA helicase SUB2 (432 aa)
     
 
  0.831
CC1G_03004
Uncharacterized protein (1824 aa)
     
 
  0.805
CC1G_12098
Polyadenylated RNA binding protein (574 aa)
     
 
  0.804
CC1G_11206
Uncharacterized protein (2101 aa)
     
 
  0.796
CC1G_05762
Uncharacterized protein (707 aa)
       
 
  0.792
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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