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CC1G_06533 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06533" - Ribosomal processing in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06533Ribosomal processing; RNA-binding domain-containing protein (987 aa)    
Predicted Functional Partners:
CC1G_05394
RNA-binding protein (697 aa)
     
 
  0.998
CC1G_11923
tRNA (cytosine-5-)-methyltransferase NSUN2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (576 aa)
     
 
  0.998
CC1G_03591
ATP-dependent RNA helicase MAK5; Belongs to the DEAD box helicase family (759 aa)
     
 
  0.997
CC1G_06273
RNA binding protein (406 aa)
     
 
0.997
CC1G_01996
rRNA processing protein RRP12 (1256 aa)
     
 
  0.996
CC1G_05830
Puf family RNA-binding protein (669 aa)
     
      0.995
CC1G_05133
rRNA binding protein (432 aa)
     
      0.995
CC1G_11196
Uncharacterized protein (706 aa)
     
 
  0.995
CC1G_14965
Uncharacterized protein (422 aa)
     
 
  0.995
CC1G_05696
Ribosome biogenesis protein RPF2 (391 aa)
     
 
  0.995
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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