STRINGSTRING
TPI protein (Coprinopsis cinerea) - STRING interaction network
"TPI" - Triosephosphate isomerase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPITriosephosphate isomerase; Belongs to the triosephosphate isomerase family (251 aa)    
Predicted Functional Partners:
CC1G_15643
Glucose-6-phosphate isomerase; Belongs to the GPI family (552 aa)
   
  0.999
CC1G_05205
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (417 aa)
 
  0.999
CC1G_00616
Enolase (444 aa)
 
 
  0.999
CC1G_06653
Fructose-bisphosphate aldolase (358 aa)
   
 
  0.996
CC1G_09116
Glyceraldehyde-3-phosphate dehydrogenase (339 aa)
 
  0.994
CC1G_09117
Glyceraldehyde 3-phosphate dehydrogenase (298 aa)
 
  0.994
CC1G_06383
Uncharacterized protein (286 aa)
   
 
  0.987
CC1G_10283
Pyruvate kinase; Belongs to the pyruvate kinase family (530 aa)
   
   
  0.982
CC1G_03857
Transketolase (686 aa)
   
  0.981
CC1G_00317
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (515 aa)
     
 
  0.976
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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